Appendix 7 – Parental Contribution, Effective Population Size and Genetic Worth


1.      Parental Contribution

1.1    Vegetative lot

The parental contribution (Pi ) of a particular parent tree to a vegetative lot is determined in accordance with the following formula:

Pi = Xi  / Xn

where:

Xi =   total number of cuttings or propagules collected from parent tree i in the lot

Xn =   total number of cuttings or propagules collected from all parent trees n in the lot

1.2    Seedlots

The parental contribution (Pi) of a particular parent tree to a seedlot is determined in accordance with the following formula:

Pi = (Fi + Mi) / 2

where:

Fi =   female gametic contribution for parent tree i as determined below

Mi =  male gametic contribution for parent tree i as determined below

Determining Fi

The female gametic contribution of a particular parent tree is determined in accordance with the following formula:

Fi =            Xi  / Xn

where:

Xi =   seed contribution of parent tree i as determined in accordance with generally accepted scientific methodology

Xn =   total seed contribution of all parent trees n

Determining Mi

The male gametic contribution of a particular parent tree is determined in accordance with the following formula:

Mi = Yi  / Yn

where:

Yi =   pollen contribution of parent tree i as determined in accordance with generally accepted scientific methodology

Yn =   total pollen contribution of all parent trees n


2.            Effective Population Size

The effective population size (Ne) for a lot collected from parent trees is determined in accordance with the applicable formula set out below.

2.1    Unrelated parent trees

The Ne for lots collected from parent trees that are not related to each other is determined in accordance with the following formula:

Ne = 1 / ∑(Pi2)

where:

Pi =   parental contribution for parent tree i asdetermined in accordance with the formula set out in
(a)     section 1.1 if the lot is a vegetative lot, or
(b)     section 1.2 if the lot is a seedlot

2.2    Related parent trees

The Ne for lots collected from parent trees where two or more of the parent trees are related to each other is determined in accordance with the following formula:

Ne = 0.5 / ∑(Pi Pj cij)

where:

Pi =   parental contribution for parent tree i asdetermined in accordance with the formula set out in
(a)     section 1.1 if the lot is a vegetative lot, or
(b)     section 1.2 if the lot is a seedlot

Pj =   parental contribution for parent tree j asdetermined in accordance with the formula set out
(a)     section 1.1 if the lot is a vegetative lot, or
(b)     section 1.2 if the lot is a seedlot

cij =   coefficient of relatedness (co-ancestry) between parent tree i and parent tree j as determined below

Determining cij

If parent tree i and parent tree j are the same, then cij = 0.50

If parent tree i and parent tree j have the same parent trees, or if parent tree i is the parent of parent tree j or vice versa, then cij = 0.25

If parent tree i and parent tree j share one common parent tree, then cij  = 0.125

If parent tree i and parent tree j are not related in any way, then cij  = 0


3.         Genetic Worth

In this section, “pollen contamination” means pollen, originating from a natural stand outside a seed orchard, that contributes to the pollination of female cones on parent trees in the orchard.

The genetic worth (GW) for lots collected from parent trees is determined in accordance with the applicable formula set out below.

3.1    Vegetative lots

The GW for a vegetative lot collected from parent trees is determined in accordance with whichever of the following formulas applies:

GW = ∑ Pi CVi   or  GW = ∑ Pi BVi

where:

Pi =   parental contribution for parent tree i as determined in accordance with section 1.1

CVi = clonal value of parent tree i

BVi = breeding value of parent tree i

In the case of a vegetative lot registered as a custom lot, a breeding value determined in accordance with the requirements of section 5.4.6 of the standards is always used to calculate GW.

3.2    Seedlots

The GW of seedlots collected from parent trees is calculated in accordance with the applicable formula set out in sections 3.2.1 through 3.2.3 below.

In the case of a seedlot registered as a custom lot, a breeding value determined in accordance with the requirements of section 5.4.6 of the standards is always used to calculate GW.

3.2.1     Seedlots produced in a seed orchard without pollen contamination

The GW for seedlots produced in seed orchards not subject to pollen contamination is determined in accordance with the following formula:

GW = ∑ BVi (Fi + Mi) / 2

where:

BV i= breeding value of parent tree i

Fi  =   female gametic contribution of parent tree i

Mi  = male gametic contribution of parent tree i

3.2.2     Seedlots produced in a seed orchard with pollen contamination

The GW for seedlots produced in seed orchards subject to pollen contamination is determined in accordance with the following formula:

GW = ∑ {(PC × BVCP)+ BVi [Fi + Mi (1-PC)]} / 2

where:

PC =      the proportion of contaminant pollen, expressed as a percentage of the total amount of pollen pollinating parent tree i, as determined in accordance with generally accepted scientific methodology

BVCP = breeding value of contaminant pollen as determined in accordance with generally accepted scientific methodology

BVi =     breeding value of parent tree i

Fi =        female gametic contribution of parent tree i

Mi =      male gametic contribution of parent tree i


3.2.3     Seedlots produced through a controlled cross of parent trees in a seed orchard

The GW for seedlots produced through a controlled cross where two or more parent trees are mated, and pollen from all other sources is excluded, is determined in accordance with the following formula:

GW = ∑ nij [(BVi  + BVj) / 2] / n

where:

BVi = breeding value of parent tree i from which cones or seeds are collected

BVj = breeding value of parent tree j contributing to the pollen mix as determined below

nijnumber of cones or seeds from parent tree i crossed with pollen from parent tree j

n =    total number of seeds or cones of all parent trees

Determining BVj

If the pollen used in the controlled cross is collected from a single  parent tree, BVj is the breeding value of that parent tree.

If the pollen used in the controlled cross is collected from two or more parent trees, BVj is the mean breeding value of the pollen mix, as determined in accordance with the following formula:

BVj = ∑BVk wk / w

where:

BVk = breeding value of parent k contributing to the pollen mix

wk =   the volume or weight of parent k contributing to the pollen mix

w =   the total volume or weight of the pollen mix